Janouškovec, J*, Liu, S-L, Martone, PT, Carré, W, Leblanc, C, Collén, J, Keeling, PJ: Evolution of red algal plastid genomes: Ancient architectures, introns, horizontal gene transfer, and taxonomic utility of plastid markers. PLOS ONE 8, e59001, 2013. https://doi.org/10.1371/journal.pone.0059001

Janouškovec, J*, Tikhonenkov, DV, Mikhailov, KV, Simdyanov, TG, Aleoshin, VV, Mylnikov, AP, Keeling, PJ*: Colponemids represent multiple ancient alveolate lineages. Current Biology 23, 2546–52, 2013. https://doi.org/10.1016/j.cub.2013.10.062

Janouškovec, J*, Sobotka, R, Lai, D-H, Flegontov, P, Koník, P, Komenda, J, Ali, S, Prášil, O, Pain, A, Oborník, M, Lukeš, J, Keeling, PJ: Split photosystem protein, linear-mapping topology, and growth of structural complexity in the plastid genome of Chromera velia. Molecular Biology and Evolution 30, 2447–62, 2013. https://doi.org/10.1093/molbev/mst144

Fulnečková, J, Ševčíková, T, Fajkus, J, Lukešová, A, Lukeš, M, Vlček, Č, Lang, BF, Kim, E, Eliáš, M, Sýkorová, E: A Broad Phylogenetic Survey Unveils the Diversity and Evolution of Telomeres in Eukaryotes. Genome Biology and Evolution 5, 468-483, 2013.

Pombert, J-F*, James, ER, Janouškovec, J, Keeling, PJ: Evidence for transitional stages in the evolution of euglenid group II introns and twintrons in the Monomorphina aenigmatica plastid genome. PLOS ONE 7, e53433, 2012.https://doi.org/10.1371/journal.pone.0053433

Janouškovec, J, Horák, A, Barott, KL, Rohwer, FL, Keeling, PJ*: Global analysis of plastid diversity reveals apicomplexan-related lineages in coral reefs. Current Biology 22, R518-9, 2012. https://doi.org/10.1016/j.cub.2012.04.047

Worden, AZ*, Janouskovec, J, McRose, D, Engman, A, Welsh, RM, Malfatti, S, Tringe, SG, Keeling, PJ: Global distribution of a wild alga revealed by targeted metagenomics. Current Biology 22, R675-7, 2012. https://doi.org/10.1016/j.cub.2012.07.054

Oborník, M, Modrý, D, Lukeš, M, Černotíková-Stříbrná, E, Cihlář, J, Tesařová, M, Kotabová, E, Vancová, M, Prášil, O, Lukeš, J: Morphology, ultrastructure and life cycle of Vitrella bassicaformis n. sp., m. gen., a novel chromerid from the Great Barrier Reef. Protist 163, 306-323, 2012.

Barott, KL*, Rodriguez-Brito, B, Janouškovec, J, Marhaver, K, Smith, JE, Keeling, P, Rohwer, FL: Microbial diversity associated with four functional groups of benthic reef algae and the reef-building coral Montastraea annularis. Environmental Microbiology 13, 1192–204, 2011. https://doi.org/10.1111/j.1462-2920.2010.02419.x

Botté, CY, Yamaryo-Botté, Y, Janouškovec, J, Rupasinghe, T, Keeling, PJ, Crellin, P, Coppel, RL, Maréchal, E, McConville, MJ, McFadden, GI*: Identification of plant-like galactolipids in Chromera velia, a photosynthetic relative of malaria parasites. The Journal of Biological Chemistry 286, 29893–903, 2011. https://doi.org/10.1074/jbc.M111.254979

Oborník, M, Vancová, M, Lai, D-H, Janouškovec, J, Keeling, PJ, Lukeš, J*: Morphology and ultrastructure of multiple life cycle stages of the photosynthetic relative of Apicomplexa, Chromera velia. Protist 162, 115–30, 2011. https://doi.org/10.1016/j.protis.2010.02.004

Kořený, L, Sobotka, R, Janouškovec, J, Keeling, PJ, Oborník, M*: Tetrapyrrole synthesis of photosynthetic chromerids is likely homologous to the unusual pathway of apicomplexan parasites. The Plant Cell 23, 3454–62, 2011. https://doi.org/10.1105/tpc.111.089102

Koblížek, M*, Janouškovec, J, Oborník, M, Johnson, JH, Ferriera, S, Falkowski, PG: Genome sequence of the marine photoheterotrophic bacterium Erythrobacter sp. strain NAP1. Journal of Bacteriology 193, 5881–2, 2011. https://doi.org/10.1128/JB.05845-11

Janouškovec, J, Horák, A, Oborník, M, Lukeš, J, Keeling PJ*: A common red algal origin of the apicomplexan, dinoflagellate, and heterokont plastids. Proceedings of the National Academy of Sciences of the United States of America 107, 10949–54, 2010. https://doi.org/10.1073/pnas.1003335107

Zrzavý, J*, Říha, P, Piálek, L, Janouškovec, J: Phylogeny of Annelida (Lophotrochozoa): total-evidence analysis of morphology and six genes. BMC Evolutionary Biology 9, 189, 2009. https://doi.org/10.1186/1471-2148-9-189

Oborník, M*, Janouškovec, J, Chrudimský, T, Lukeš, J: Evolution of the apicoplast and its hosts: from heterotrophy to autotrophy and back again. International Journal for Parasitology 39, 1–12, 2009. https://doi.org/10.1016/j.ijpara.2008.07.010

Moore, RB, Oborník, M, Janouškovec, J, Chrudimský, T, Vancová, M, Green, DH, Wright, SW, Davies, NW, Bolch, CJS, Heimann, K, Slapeta, J, Hoegh-Guldberg, O, Logsdon, JM, Carter, DA*: A photosynthetic alveolate closely related to apicomplexan parasites. Nature 451, 959–63, 2008. https://doi.org/10.1038/nature06635