Pombert, J-F, Smirnov, A, James, ER, Janouškovec, J, Gray, MW, Keeling PJ*: The complete mitochondrial genome from an unidentified Phalansterium species. Protist Genomics 1, 25–32, 2013. https://doi.org/10.2478/prge-2013-0002

Janouškovec, J*, Horák, A, Barott, KL, Rohwer, FL, Keeling, PJ: Environmental distribution of coral-associated relatives of apicomplexan parasites. The ISME Journal 7, 444–7, 2013. https://doi.org/10.1038/ismej.2012.129

Janouškovec, J*, Liu, S-L, Martone, PT, Carré, W, Leblanc, C, Collén, J, Keeling, PJ: Evolution of red algal plastid genomes: Ancient architectures, introns, horizontal gene transfer, and taxonomic utility of plastid markers. PLOS ONE 8, e59001, 2013. https://doi.org/10.1371/journal.pone.0059001

Janouškovec, J*, Tikhonenkov, DV, Mikhailov, KV, Simdyanov, TG, Aleoshin, VV, Mylnikov, AP, Keeling, PJ*: Colponemids represent multiple ancient alveolate lineages. Current Biology 23, 2546–52, 2013. https://doi.org/10.1016/j.cub.2013.10.062

Masojídek, J, Torzillo, G, Koblížek, M: Photosynthesis in Microalgae. In: Handbook of Microalgal Culture: Applied Phycology and Biotechnology, Second Edition. Blackwell Publishing, 21-36, 2013.

Kouba, A, Sales, J, Sergejevová, M, Kozák, P, Masojídek, J: Colour intensity in angelfish (Pterophyllum scalare) as influenced by dietary microalgae addition. Journal of Applied Ichthyology 29(1), 193–199, 2013.

Šetlíková, E, Sofrová, D, Kovář, V, Budáč, P: Isolation and characterisation of oxygen-evolving photosystem II particles and photosystem II core complex from the filamentous cyanobacterium Spirulina platensis. Photosynthetica 51, 517-530, 2013.

Zheng, Q, Koblížek, M, Beatty, JT, Jiao, N: Evolutionary divergence of marine aerobic anoxygenic phototrophic bacteria as seen from diverse organisations of their photosynthesis gene clusters. Advances in Botanical Research 66, 359-383, 2013.

Zeng, YH, Koblížek, M, Li, YX, Liu, YP, Feng, FY, Ji, JD, Jian, JC, Wu, ZH: Long PCR-RFLP of 16S-ITS-23R rRNA genes: a high-resolution molecular tool for bacterial genotyping. Journal of Applied Microbiology 114, 433-447, 2013.

Zeng, Y, Koblížek, M, Feng, F, Liu, Y, Wu, Z, Jian, J: Whole-genome sequences of an aerobic anoxygenic phototroph, Blastomonas sp. strain AAP53, isolated from a freshwater desert lake in Inner Mongolia, China. Genome Anouncements 1(2), e00071-13, 2013.

Zeng, Y, Feng, F, Liu, Y, Li, Y, Koblížek, M: Genome sequences and photosynthesis gene cluster composition of a freshwater aerobic anoxygenic phototroph, Sandarakinorhabdus asp. strain AAP62, isolated from the Shahu Lake in Ningxia, China. Genome Announcements 1(1), e00034-13, 2013.

Vredenberg, W, Prášil, O: On the polyphasic quenching kinetics of chlorophyll a fluorescence in algae after light pulses of variable length. Photosynthesis Research 117, 321-337, 2013.

Vondrák, J, Frolov, I, Říha, P, Hrouzek, P, Palice, Z, Nadyeina, O, Halici, G, Khodosovtsev, A, Roux, C: New crustose Teloschistaceae in Central Europe. Lichenologist 45(6), 701-722, 2013.

Urban, J, Hrouzek, P, Štys, D, Martens, H: Estimation of Ion Competition via Correlated Responsivity Offset in Linear Ion Trap Mass Spectrometry Analysis: Theory and Practical Use in the Analysis of Cyanobacterial Hepatotoxin Microcystin-LR in Extracts of Food Additives. Biomed Research International, 414631, 2013.

Urban, J, Štys, D, Sergejevová, M, Masojídek, J: Expertomica Fishgui: comparison of fish skin colour. Journal of Applied Ichthyology 29, 172-180, 2013.

Šlouf, V, Fuciman, M, Dulebo, A, Kaftan, D, Koblížek, M, Frank, HA, Polívka, T: Carotenoid Charge Transfer States and Their Role in Energy Transfer Processes in LH1-RC Complexes from Aerobic Anoxygenic Phototrophs. Journal of Physical Chemistry B 117, 10987-10999, 2013.

Ševčíková, T, Bišová, K, Fojtová, M, Lukešová, A, Hrčková, K, Sýkorová, E: Completion of cell division is associated with maximum telomerase activity in naturally synchronized cultures of the green alga Desmodesmus quadricauda. FEBS Letters 587, 743-748, 2013.

Sergejevová, M, Masojídek, J: Chlorella biomass as feed supplement for freshwater fish: sterlet, Acipenser ruthenus. Aquaculture Research 44, 157-159, 2013.

Rengstl, B, Knoppová, J, Komenda, J, Nickelsen, J: Characterization of a Synechocystis double mutant lacking the photosystem II assembly factor YCF48 and Sll0933. Planta 237, 471-480, 2013.

Přibyl, P, Cepák, V, Zachleder, V: Production of lipids and formation and mobilization of lipid bodies in Chlorella vulgaris. Journal of Applied Phycology 25, 545-553, 2013.