Centre Algatech

Institute of Michrobiology, Academy of Sciences of the Czech Republic

Publications

PublicationYear

Kopejtka, K, Tomasch, J, Shivaramu, S, Saini, MK, Kaftan, D, Koblížek, M*: Minimal transcriptional regulation of horizontally transferred photosynthesis genes in phototrophic bacterium Gemmatimonas phototrophica. mSystems 9(9), e0070624, 2024. https://doi.org/10.1128/msystems.00706-24


2024

Tomasch, J*, Kopejtka, K, Shivaramu, S, Mujakić, I, Koblížek, M: On the evolution of chromosomal regions with high gene strand bias in bacteria. mBio 15(6), e0060224, 2024. https://doi.org/10.1128/mbio.00602-24


2024

Tomasch, J, Kopejtka, K, Bílý, T, Gardiner, AT, Gardian, Z, Shivaramu, S, Koblížek, M, Kaftan, D*: A photoheterotrophic bacterium from Iceland has adapted its photosynthetic machinery to the long days of polar summer. mSystems 9(3), e0131123, 2024. https://doi.org/10.1128/msystems.01311-23


2024

Muñoz-Gómez, SA*, Cadena, LR, Gardiner, AT, Leger, MM, Sheikh, S, Connell, LB, Bilý, T, Kopejtka, K, Beatty, JT, Koblížek, M, Roger, AJ, Slamovits, CH, Lukeš, J, Hashimi, H*: Intracytoplasmic-membrane development in alphaproteobacteria involves the homolog of the mitochondrial crista-developing protein Mic60. Current Biology 33(6), 1099-1111, 2023. https://doi.org/10.1016/j.cub.2023.02.059


2023

Shivaramu, S, Tomasch, J, Kopejtka, K, Nupur, Saini, MK, Bokhari, SNH, Küpper, H, Koblížek, M*: The Influence of Calcium on the Growth, Morphology and Gene Regulation in Gemmatimonas phototrophica. Microorganisms 11(1), 27, 2023. https://doi.org/10.3390/microorganisms11010027


2023

Gardiner, TA, Mujakić, I, Bína, D, Gardian, Z, Kopejtka, K, Nupur, Qian, P, Koblížek, M*: Characterisation of the photosynthetic complexes from the marine gammaproteobacterium Congregibacter litoralis KT71. Biochimica et Biophysica Acta (BBA) - Bioenergetics 1864(2), 148946, 2023. https://doi.org/10.1016/j.bbabio.2022.148946


2023

Kopejtka, K, Tomasch, J, Kaftan, D, Gardiner, AT, Bína, D, Gardian, Z, Bellas, C, Dröge, A, Geffers, R, Sommaruga, R, Koblížek, M*: A bacterium from a mountain lake harvests light using both proton-pumping xanthorhodopsins and bacteriochlorophyll-based photoystems. PNAS 119(50), e2211018119, 2022. https://doi.org/10.1073/pnas.2211018119


2022

Koblížek, M*, Hávová, D, Kopejtka, K, Tomasch, J, Bišová, K: Distribution of cycle threshold values in RT-qPCR tests during the autumn 2020 peak of the COVID-19 pandemic in the Czech Republic. Access Microbiology 3(9), 000263, 2021. https://doi.org/10.1099/acmi.0.000263


2021

Kopejtka, K, Zeng, Y, Kaftan, D, Selyanin, V, Gardian, Z, Tomasch, J, Sommaruga, R, Koblížek, M*: Characterization of the Aerobic Anoxygenic Phototrophic Bacterium Sphingomonas sp. AAP5. Microorganisms 9(4), 768, 2021. https://doi.org/10.3390/microorganisms9040768


2021

Kopejtka, K, Tomasch, J, Zeng, Y, Selyanin, V, Dachev, M, Piwosz, K, Tichý, M, Bína, D, Gardian, Z, Bunk, B, Brinkmann, H, Geffers, R, Sommaruga, R, Koblížek, M*: Simultaneous Presence of Bacteriochlorophyll and Xanthorhodopsin Genes in a Freshwater Bacterium. mSystems 5, e01044-20, 2020. https://doi.org/10.1128/mSystems.01044-20


2020

Kopejtka, K, Lin, Y, Jakubovičová, M, Koblížek, M, Tomasch, J*: Clustered Core- and Pan-Genome Content on Rhodobacteraceae Chromosomes. Genome Biology and Evolution 11(8), 2208-2217, 2019. https://doi.org/10.1093/gbe/evz138


2019

Kaftan, D, Medová, H, Selyanin, V, Kopejtka, K, Koblížek, M*: Extended temperature optimum of photosynthetic reaction centers in Rhodobacterales. Photosynthetica 57(2), 361-366, 2019. http://dx.doi.org/10.32615/ps.2019.039


2019

Strunecký, O*, Kopejtka, K, Goecke, F, Tomasch, J, Lukavský, J, Neori, A, Kahl, S, Pieper, DH, Pilarski, P, Kaftan, D, Koblížek, M: High diversity of thermophilic cyanobacteria in Rupite hot spring identified by microscopy, cultivation, single-cell PCR and amplicon sequencing. Extremophiles 23(1), 35-48, 2019. https://doi.org/10.1007/s00792-018-1058-z


2019

Kopejtka, K, Tomasch, J, Bunk, B, Spröer, C, Wagner-Döbler, I, Koblížek, M*: The complete genome sequence of Rhodobaca barguzinensis alga05 (DSM 19920) documents its adaptation for life in soda lakes. Extremophiles 22(6), 839-849, 2018. https://doi.org/10.1007/s00792-018-1041-8


2018

Piwosz, K, Shabarova, T, Tomasch, J, Šimek, K, Kopejtka, K, Kahl, S, Pieper, DH, Koblížek, M*: Determining lineage-specific bacterial growth curves with a novel approach based on amplicon reads normalization using internal standard (ARNIS). ISME Journal 12(11), 2640-2654, 2018. https://doi.org/10.1038/s41396-018-0213-y


2018

Kopejtka, K, Tomasch, J, Zeng, Y, Tichý, M, Sorokin, DY, Koblížek, M*: Genomic Analysis of the Evolution of Phototrophy among Haloalkaliphilic Rhodobacterales. Genome Biology and Evolution 9(7), 1950-1962, 2017. https://doi.org/10.1093/gbe/evx141


2017

Kopejtka, K, Koblížek, M: Bojovník s epidemiemi. Vesmír 95, 440-443, 2016.


2016

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