Laboratory of Photosynthesis
Josef Komenda`s group
Biogenesis of Photosystem II
Publications
Publication | Year |
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Chen, GE, Hitchcock, A, Mareš, J, Gong, Y, Tichý, M, Pilný, J, Kovářová, L, Zdvihalová, B, Xu, J, Hunter, CN, Sobotka, R*: Evolution of Ycf54-independent chlorophyll biosynthesis in cyanobacteria. PNAS 118(10), e2024633118, 2021. https://doi.org/10.1073/pnas.2024633118 | 2021 |
Martínková, L*, Příhodová, R, Kulik, N, Pelantová, H, Křístková, B, Petrásková, L, Biedermann, D: Biocatalyzed reactions towards functional food components 4-Alkylcatechols and their analogues. Catalysts 10(9), 1077, 2020. https://doi.org/10.3390/catal10091077 | 2020 |
Nekvasilová, P, Kulik, N, Rychlá, N, Pelantová, H, Petrásková, L, Bosáková, Z, Cvačka, J, Slámová, K, Křen, V, Bojarová, P*: How site-directed mutagenesis boosted selectivity of a promiscuous enzyme. Advanced Synthesis and Catalysis 362, 4138, 2020. https://doi.org/10.1002/adsc.202000604 | 2020 |
Rucká, L, Kulik, N, Novotný, P, Sedova, A, Petrásková, L, Příhodová, R, Křístková, B, Halada, P, Pátek, M, Martínková, L*: Plant nitrilase homologues in fungi: Phylogenetic and functional analysis with focus on nitrilases in Trametes versicolor and Agaricus bisporus. Molecules 25(17), 3861, 2020. https://doi.org/10.3390/molecules25173861 | 2020 |
Kulik, N, Kutý, M, Řeha, D*: The study of conformational changes in photosystem II during a charge separation. Journal of Molecular Modeling 26(4), 75, 2020. https://doi.org/10.1007/s00894-020-4332-9 | 2020 |
Kopejtka, K, Tomasch, J, Zeng, Y, Selyanin, V, Dachev, M, Piwosz, K, Tichý, M, Bína, D, Gardian, Z, Bunk, B, Brinkmann, H, Geffers, R, Sommaruga, R, Koblížek, M*: Simultaneous Presence of Bacteriochlorophyll and Xanthorhodopsin Genes in a Freshwater Bacterium. mSystems 5, e01044-20, 2020. https://doi.org/10.1128/mSystems.01044-20 | 2020 |
Trinugroho, JP, Bečková, M, Shao, S, Yu, J, Zhao, Z, Murray, JW, Sobotka, R, Komenda, J, Nixon, PJ*: Chlorophyll II f synthesis by a super-rogue photosystem II complex. Nature Plants 6, 238-244, 2020. https://doi.org/10.1038/s41477-020-0616-4 | 2020 |
Garcia-Oliva, C, Hoyos, P, Petrásková, L, Kulik, N, Pelantová, H, Cabanillas, AH, Rumbero, Á, Křen, V, Hernáiz, MJ, Bojarová, P*: Acceptor Specificity of β-N-Acetylhexosaminidase from Talaromyces flavus: A Rational Explanation. International Journal of Molecular Sciences 20(24), 6181, 2019. https://doi.org/10.3390/ijms20246181 | 2019 |
Rucká, L, Chmátal, M, Kulik, N, Petrásková, L, Pelantová, H, Novotný, P, Příhodová, R, Pátek, M, Martínková, L*: Genetic and functional diversity of nitrilases in agaricomycotina. International Journal of Molecular Sciences 20(23), 5990, 2019. https://doi.org/10.3390/ijms20235990 | 2019 |
Bojarová, P*, Kulik, N, Slámová, K, Hubálek, M, Kotik, M, Cvačka, J, Pelantová, H, Křen, V: Selective β-N-acetylhexosaminidase from Aspergillus versicolor-a tool for producing bioactive carbohydrates. Applied microbiology and biotechnology 103(4), 1737–1753, 2019. https://doi.org/10.1007/s00253-018-9534-z | 2019 |
Bojarová, P*, Kulik, N, Hovorková, M, Slámová, K, Pelantová, H, Křen, V: The β-N-Acetylhexosaminidase in the synthesis of bioactive glycans: Protein and reaction engineering. Molecules 24(3), 599, 2019. https://doi.org/10.3390/molecules24030599 | 2019 |
Krynicka, V*, Georg, J, Jackson, PJ, Dickman, MJ, Hunter, CN, Futschik, ME, Hess, WR, Komenda, J: Depletion of the FtsH1/3 proteolytic complex suppresses the nutrient stress response in the cyanobacterium Synechocystis PCC6803. Plant Cell 31, 2912–2928, 2019. https://doi.org/10.1105/tpc.19.00411 | 2019 |
Strašková, A, Steinbach, G, Konert, G, Kotabová, E, Komenda, J, Tichý, M, Kaňa, R*: Pigment-protein complexes are organized into stable microdomains in cyanobacterial thylakoids. BBA – Bioenergetics 1860(12), 148053, 2019. https://doi.org/10.1016/j.bbabio.2019.07.008 | 2019 |
Komenda, J*, Sobotka R: Chlorophyll-binding subunits of photosystem I and II: Biosynthesis, chlorophyll incorporation and assembly. Advances in Botanical Research 91, 195-223, 2019. https://doi.org/10.1016/bs.abr.2019.02.001 | 2019 |
Kiss, E, Knoppová, J, Pascual Aznar, G, Pilný, J, Yu, J, Halada, P, Nixon, PJ, Sobotka, R, Komenda, J*: A Photosynthesis-Specific Rubredoxin-Like Protein Is Required for Efficient Associaton of the D1 and D2 Proteins during the Initial Steps of Photosystem II Assembly. Plant Cell 31(9), 2241-2258, 2019. https://doi.org/10.1105/tpc.19.00155 | 2019 |
Knoppová, J*, Komenda, J: Sequential deletions of photosystem II assembly factors Ycf48, Ycf39 and Pam68 result in progressive loss of autotrophy in the cyanobacterium Synechocystis PCC 6803. Folia Microbiologica 64(5), 683-689, 2019. https://doi.org/10.1007/s12223-019-00736-w | 2019 |
Komenda, J, Krynická, V, Zakar, T*: Isolation of Thylakoid Membranes from the Cyanobacterium Synechocystis sp. PCC 6803 and Analysis of Their Photosynthetic Pigment-protein Complexes by Clear Native-PAGE. Bio-protocol 9(1), e3126, 2019. https://doi.org/10.21769/bioprotoc.3126 | 2019 |
Borthakur, P, Boruah, PK, Das, MR*, Kulik, N, Minofar, B*: Adsorption of 17α-ethynyl estradiol and β-estradiol on graphene oxide surface: An experimental and computational study. Journal of Molecular Liquids 269, 160-168, 2018. https://doi.org/10.1016/j.molliq.2018.08.013 | 2018 |
D'Oronzo, E, Secundo, F*, Minofar, B*, Kulik, N, Pometun, AA, Tishkov, VI: Activation/inactivation role of ionic liquids on formate dehydrogenase from Pseudomonas sp. 101 and its mutated thermostable form. ChemCatChem 10, 3247, 2018. https://doi.org/10.1002/cctc.201800145 | 2018 |
Yu, J*, Knoppová, J, Michoux, F, Bialek, W, Cota, E, Shukla, MK, Strašková, A, Pascual Aznar, G, Sobotka, R, Komenda, J, Murray, JW, Nixon, PJ*: Ycf48 involved in the biogenesis of the oxygen-evolving photosystem II complex is a seven-bladed beta-propeller protein. Proceedings of the National Academy of Sciences of the United States of America 115(33), E7824-E7833, 2018. https://doi.org/10.1073/pnas.1800609115 | 2018 |