Centre Algatech

Institute of Michrobiology, Academy of Sciences of the Czech Republic

Publications

PublicationYear

Chen, GE, Hitchcock, A, Mareš, J, Gong, Y, Tichý, M, Pilný, J, Kovářová, L, Zdvihalová, B, Xu, J, Hunter, CN, Sobotka, R*: Evolution of Ycf54-independent chlorophyll biosynthesis in cyanobacteria. PNAS 118(10), e2024633118, 2021. https://doi.org/10.1073/pnas.2024633118


2021

Martínková, L*, Příhodová, R, Kulik, N, Pelantová, H, Křístková, B, Petrásková, L, Biedermann, D: Biocatalyzed reactions towards functional food components 4-Alkylcatechols and their analogues. Catalysts 10(9), 1077, 2020. https://doi.org/10.3390/catal10091077


2020

Nekvasilová, P, Kulik, N, Rychlá, N, Pelantová, H, Petrásková, L, Bosáková, Z, Cvačka, J, Slámová, K, Křen, V, Bojarová, P*: How site-directed mutagenesis boosted selectivity of a promiscuous enzyme. Advanced Synthesis and Catalysis 362, 4138, 2020. https://doi.org/10.1002/adsc.202000604


2020

Rucká, L, Kulik, N, Novotný, P, Sedova, A, Petrásková, L, Příhodová, R, Křístková, B, Halada, P, Pátek, M, Martínková, L*: Plant nitrilase homologues in fungi: Phylogenetic and functional analysis with focus on nitrilases in Trametes versicolor and Agaricus bisporus. Molecules 25(17), 3861, 2020. https://doi.org/10.3390/molecules25173861


2020

Kulik, N, Kutý, M, Řeha, D*: The study of conformational changes in photosystem II during a charge separation. Journal of Molecular Modeling 26(4), 75, 2020. https://doi.org/10.1007/s00894-020-4332-9


2020

Kopejtka, K, Tomasch, J, Zeng, Y, Selyanin, V, Dachev, M, Piwosz, K, Tichý, M, Bína, D, Gardian, Z, Bunk, B, Brinkmann, H, Geffers, R, Sommaruga, R, Koblížek, M*: Simultaneous Presence of Bacteriochlorophyll and Xanthorhodopsin Genes in a Freshwater Bacterium. mSystems 5, e01044-20, 2020. https://doi.org/10.1128/mSystems.01044-20


2020

Trinugroho, JP, Bečková, M, Shao, S, Yu, J, Zhao, Z, Murray, JW, Sobotka, R, Komenda, J, Nixon, PJ*: Chlorophyll II f synthesis by a super-rogue photosystem II complex. Nature Plants 6, 238-244, 2020. https://doi.org/10.1038/s41477-020-0616-4


2020

Garcia-Oliva, C, Hoyos, P, Petrásková, L, Kulik, N, Pelantová, H, Cabanillas, AH, Rumbero, Á, Křen, V, Hernáiz, MJ, Bojarová, P*: Acceptor Specificity of β-N-Acetylhexosaminidase from Talaromyces flavus: A Rational Explanation. International Journal of Molecular Sciences 20(24), 6181, 2019. https://doi.org/10.3390/ijms20246181


2019

Rucká, L, Chmátal, M, Kulik, N, Petrásková, L, Pelantová, H, Novotný, P, Příhodová, R, Pátek, M, Martínková, L*: Genetic and functional diversity of nitrilases in agaricomycotina. International Journal of Molecular Sciences 20(23), 5990, 2019. https://doi.org/10.3390/ijms20235990


2019

Bojarová, P*, Kulik, N, Slámová, K, Hubálek, M, Kotik, M, Cvačka, J, Pelantová, H, Křen, V: Selective β-N-acetylhexosaminidase from Aspergillus versicolor-a tool for producing bioactive carbohydrates. Applied microbiology and biotechnology 103(4), 1737–1753, 2019. https://doi.org/10.1007/s00253-018-9534-z


2019

Bojarová, P*, Kulik, N, Hovorková, M, Slámová, K, Pelantová, H, Křen, V: The β-N-Acetylhexosaminidase in the synthesis of bioactive glycans: Protein and reaction engineering. Molecules 24(3), 599, 2019. https://doi.org/10.3390/molecules24030599


2019

Krynicka, V*, Georg, J, Jackson, PJ, Dickman, MJ, Hunter, CN, Futschik, ME, Hess, WR, Komenda, J: Depletion of the FtsH1/3 proteolytic complex suppresses the nutrient stress response in the cyanobacterium Synechocystis PCC6803. Plant Cell 31, 2912–2928, 2019. https://doi.org/10.1105/tpc.19.00411


2019

Strašková, A, Steinbach, G, Konert, G, Kotabová, E, Komenda, J, Tichý, M, Kaňa, R*: Pigment-protein complexes are organized into stable microdomains in cyanobacterial thylakoids. BBA – Bioenergetics 1860(12), 148053, 2019. https://doi.org/10.1016/j.bbabio.2019.07.008


2019

Komenda, J*, Sobotka R: Chlorophyll-binding subunits of photosystem I and II: Biosynthesis, chlorophyll incorporation and assembly. Advances in Botanical Research 91, 195-223, 2019. https://doi.org/10.1016/bs.abr.2019.02.001


2019

Kiss, E, Knoppová, J, Pascual Aznar, G, Pilný, J, Yu, J, Halada, P, Nixon, PJ, Sobotka, R, Komenda, J*: A Photosynthesis-Specific Rubredoxin-Like Protein Is Required for Efficient Associaton of the D1 and D2 Proteins during the Initial Steps of Photosystem II Assembly. Plant Cell 31(9), 2241-2258, 2019. https://doi.org/10.1105/tpc.19.00155


2019

Knoppová, J*, Komenda, J: Sequential deletions of photosystem II assembly factors Ycf48, Ycf39 and Pam68 result in progressive loss of autotrophy in the cyanobacterium Synechocystis PCC 6803. Folia Microbiologica 64(5), 683-689, 2019. https://doi.org/10.1007/s12223-019-00736-w


2019

Komenda, J, Krynická, V, Zakar, T*: Isolation of Thylakoid Membranes from the Cyanobacterium Synechocystis sp. PCC 6803 and Analysis of Their Photosynthetic Pigment-protein Complexes by Clear Native-PAGE. Bio-protocol 9(1), e3126, 2019. https://doi.org/10.21769/bioprotoc.3126


2019

Borthakur, P, Boruah, PK, Das, MR*, Kulik, N, Minofar, B*: Adsorption of 17α-ethynyl estradiol and β-estradiol on graphene oxide surface: An experimental and computational study. Journal of Molecular Liquids 269, 160-168, 2018. https://doi.org/10.1016/j.molliq.2018.08.013


2018

D'Oronzo, E, Secundo, F*, Minofar, B*, Kulik, N, Pometun, AA, Tishkov, VI: Activation/inactivation role of ionic liquids on formate dehydrogenase from Pseudomonas sp. 101 and its mutated thermostable form. ChemCatChem 10, 3247, 2018. https://doi.org/10.1002/cctc.201800145


2018

Yu, J*, Knoppová, J, Michoux, F, Bialek, W, Cota, E, Shukla, MK, Strašková, A, Pascual Aznar, G, Sobotka, R, Komenda, J, Murray, JW, Nixon, PJ*: Ycf48 involved in the biogenesis of the oxygen-evolving photosystem II complex is a seven-bladed beta-propeller protein. Proceedings of the National Academy of Sciences of the United States of America 115(33), E7824-E7833, 2018. https://doi.org/10.1073/pnas.1800609115


2018

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